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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
187
candidate regulatory elements
94
target gene predictions
56
accessible chromatin
19
binding sites
12
variant allelic effects
11
histone modifications
2
eQTL
1
chromatin state
Date released
178
September, 2022
123
February, 2021
18
June, 2020
16
August, 2021
14
January, 2020
14
May, 2020
9
November, 2021
5
October, 2022
2
February, 2024
2
May, 2021
1
August, 2017
Available data
382
bed bed3+
251
tsv
91
bed bed9
87
txt
39
bigWig
2
bigBed bed9
Organism
382
Homo sapiens
Biosample type
227
tissue
91
primary cell
60
cell line
4
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
373
AMP
9
ENCODE
Genome assembly (visualization)
382
hg19
33
GRCh38
BIOSAMPLE
TYPE
382 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
histone modifications
eQTL
chromatin state
tissue
kidney
29
14
10
1
1
2
1
renal cortex interstitium
20
9
1
1
renal pelvis
19
9
2
1
right kidney
20
10
1
left kidney
18
9
+ See 12 more…
primary cell
mammary epithelial cell
3
1
1
4
1
mammary gland epithelial cell
3
4
1
1
1
fibroblast of mammary gland
2
1
1
2
1
kidney tubule cell
3
2
2
epithelial cell of proximal tubule
2
1
1
1
1
+ See 18 more…
cell line
MCF-7
9
6
1
3
2
HEK293
3
1
1
2
1
T47D
3
2
ACHN
2
1
1
Caki2
2
1
1
+ See 7 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
renal cell carcinoma
1
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