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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
209
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
53
chromatin state
43
binding sites
38
variant allelic effects
28
histone modifications
2
caQTL
2
eQTL
Date released
151
September, 2022
127
November, 2021
111
February, 2021
58
February, 2024
24
June, 2020
20
January, 2021
17
May, 2021
15
November, 2022
14
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
7
April, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
547
bed bed3+
324
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
597
Homo sapiens
Biosample type
489
primary cell
58
tissue
32
cell line
18
in vitro differentiated cells
Organ
597
epithelium
386
kidney
375
brain
371
connective tissue
352
musculature of body
309
lung
283
intestine
225
limb
219
heart
215
bodily fluid
205
embryo
204
blood
199
skin of body
195
vasculature
172
pancreas
170
large intestine
150
blood vessel
145
extraembryonic component
116
stomach
115
liver
107
eye
87
mammary gland
84
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
57
adipose tissue
54
artery
49
thymus
45
gonad
40
esophagus
37
spinal cord
32
spleen
23
lymphoid tissue
23
testis
21
ovary
21
thyroid gland
21
vein
18
nerve
18
skeleton
17
mouth
16
bronchus
16
lymphatic vessel
12
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
443
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
596
hg19
225
GRCh38
BIOSAMPLE
TYPE
597 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
caQTL
eQTL
primary cell
endothelial cell
15
7
2
2
1
2
1
hepatocyte
8
3
1
1
1
2
4
endothelial cell of umbilical vein
2
4
6
5
2
foreskin keratinocyte
4
11
4
keratinocyte
2
5
3
3
1
1
2
+ See 94 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 12 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
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