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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
1357
target gene predictions
976
histone modifications
903
accessible chromatin
817
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
1572
February, 2021
846
September, 2022
333
November, 2021
291
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4252
bed bed3+
900
tsv
bed bed9
546
bigWig
108
txt
40
bigBed bed9
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
4206
Homo sapiens
Biosample type
1798
cell line
1267
primary cell
913
tissue
268
in vitro differentiated cells
4
stem cell
Organ
447
epithelium
250
connective tissue
198
brain
150
kidney
143
bodily fluid
138
blood
135
musculature of body
135
pancreas
121
embryo
115
intestine
113
vasculature
108
lung
103
heart
90
skin of body
84
blood vessel
81
limb
80
eye
78
liver
68
large intestine
67
uterus
53
extraembryonic component
45
bone element
45
mammary gland
42
stomach
36
artery
36
prostate gland
33
lymph node
30
adipose tissue
29
adrenal gland
27
placenta
27
small intestine
26
penis
20
gonad
20
ureter
18
thymus
16
esophagus
13
spinal cord
11
pituitary gland
11
skeleton
11
spleen
11
vein
10
bronchus
10
lymphatic vessel
10
testis
9
bone marrow
9
lymphoid tissue
9
ovary
9
thyroid gland
8
nerve
5
mouth
5
trachea
4
breast
4
urinary bladder
3
tongue
2
nose
2
vagina
Project
3839
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
4244
hg19
800
GRCh38
1
hg18
files.file_type!
bed bed9
bed bed9+
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
4252 results
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Clear Filters
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
55
1
H1-hESC
39
1
1
2
K562
23
1
1
2
1
A549
19
1
1
2
breast cancer cell
11
9
+ See 735 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
5
30
4
endothelial cell
7
1
15
2
2
2
1
fibroblast
4
16
1
6
pericyte cell
10
10
+ See 322 more…
tissue
heart
20
1
5
1
2
kidney
14
2
10
1
1
1
retina
3
1
23
1
1
stomach
21
1
3
brain
16
3
2
1
1
+ See 209 more…
in vitro differentiated cells
neural progenitor cell
5
14
10
adipocyte
6
1
4
1
4
hematopoietic multipotent progenitor cell
10
1
1
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
1
5
1
+ See 96 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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