Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
525
accessible chromatin
40
chromatin state
9
gene expression
4
variant allelic effects
2
target gene predictions
Date released
222
November, 2021
71
January, 2020
56
May, 2020
38
February, 2024
28
January, 2021
20
August, 2021
19
April, 2020
19
February, 2023
18
May, 2021
14
February, 2021
14
October, 2019
13
November, 2019
11
November, 2022
9
May, 2019
7
April, 2019
7
May, 2022
September, 2022
4
August, 2017
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
4245
bed bed3+
898
tsv
542
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
0
bed gappedPeak
Organism
536
Homo sapiens
Biosample type
411
primary cell
148
tissue
17
in vitro differentiated cells
4
cell line
Organ
175
epithelium
57
connective tissue
57
pancreas
37
kidney
36
eye
36
vasculature
31
heart
28
blood vessel
27
brain
24
liver
19
musculature of body
18
limb
11
intestine
10
bone element
9
lung
8
artery
8
skeleton
6
adipose tissue
6
adrenal gland
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
3
nerve
3
ureter
3
vein
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
Project
311
AMP
222
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
571
hg19
410
GRCh38
month_released!
September, 2022
BIOSAMPLE
TYPE
580 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
gene expression
variant allelic effects
target gene predictions
primary cell
monocyte
16
fibroblast
14
endothelial cell
13
excitatory neuron
12
hepatocyte
7
5
+ See 179 more…
tissue
retina
16
pigmented layer of retina
13
kidney
9
2
heart left ventricle
3
3
heart
3
2
+ See 65 more…
in vitro differentiated cells
embryonic stem cell
5
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SGBS preadipocytes
2
retinal pigment epithelial cell
2
adipocyte
1
+ See 5 more…
cell line
EndoC_BH1
1
HepG2
1
glomerular visceral epithelial cell
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download