Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1072
target gene predictions
871
histone modifications
811
binding sites
513
accessible chromatin
124
variant allelic effects
35
chromatin state
10
eQTL
6
caQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2398
February, 2021
1672
September, 2022
288
June, 2020
188
May, 2021
127
May, 2020
99
October, 2022
88
February, 2024
56
January, 2021
45
March, 2020
41
November, 2022
34
August, 2017
25
February, 2023
19
April, 2020
19
August, 2021
9
May, 2022
5
September, 2023
4
January, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2022
1
June, 2021
1
November, 2019
1
October, 2019
Available data
5123
bed bed3+
792
tsv
164
bigWig
108
txt
34
bed bed9+
24
csv
16
bigBed narrowPeak
9
bigBed bed9
5
bed bed9
4
bam
3
bed gappedPeak
3
xls
Organism
5079
Homo sapiens
Biosample type
1949
cell line
1755
tissue
1098
primary cell
317
in vitro differentiated cells
4
stem cell
Organ
374
epithelium
288
brain
282
kidney
265
musculature of body
263
connective tissue
230
lung
207
intestine
162
bodily fluid
161
limb
155
skin of body
153
blood
141
heart
129
large intestine
127
vasculature
125
embryo
121
pancreas
109
extraembryonic component
95
blood vessel
92
eye
84
stomach
69
liver
67
mammary gland
63
prostate gland
61
bone element
60
small intestine
54
lymph node
54
penis
54
placenta
48
ureter
47
adrenal gland
45
adipose tissue
37
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
25
spleen
23
uterus
19
testis
17
lymphoid tissue
16
vein
15
ovary
15
thyroid gland
13
mouth
12
bronchus
12
nerve
11
lymphatic vessel
11
pituitary gland
10
bone marrow
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5048
AMP
57
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5917
hg19
GRCh38
1
hg18
assembly!
GRCh38
BIOSAMPLE
TYPE
5125 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
eQTL
caQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
A549
21
19
1
2
1
MCF-7
9
6
2
3
1
breast cancer cell
11
9
K562
7
7
1
2
1
1
neuroblastoma cell
8
4
+ See 753 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 198 more…
primary cell
CD8-positive, alpha-beta T cell
7
4
30
3
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
3
CD14-positive monocyte
8
19
CD4-positive, alpha-beta memory T cell
14
9
+ See 266 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
neural progenitor cell
5
5
1
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download