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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
640
gene expression
306
accessible chromatin
158
differential activity
72
Fine-mapped variants
25
eQTL
4
variant allelic effects
3
target gene predictions
2
chromatin state
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
281
September, 2023
192
February, 2021
101
May, 2021
96
February, 2024
82
January, 2020
79
March, 2020
69
August, 2021
57
March, 2023
53
May, 2020
47
February, 2020
30
March, 2024
28
January, 2021
20
February, 2023
19
April, 2020
12
November, 2019
11
November, 2022
9
October, 2019
7
May, 2022
4
January, 2022
4
September, 2022
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2019
1
July, 2020
1
June, 2021
Available data
5590
bed bed3+
898
tsv
869
bed bed9
324
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
1168
Homo sapiens
Biosample type
768
primary cell
332
tissue
87
in vitro differentiated cells
26
cell line
Organ
413
epithelium
284
kidney
122
pancreas
88
brain
86
connective tissue
86
vasculature
63
blood vessel
45
heart
38
liver
34
eye
31
limb
27
adipose tissue
25
artery
22
musculature of body
13
bone element
10
embryo
8
nerve
8
skeleton
6
lymphatic vessel
5
spinal cord
4
lung
3
intestine
3
ureter
2
esophagus
2
gonad
2
large intestine
2
skin of body
2
spleen
2
stomach
2
uterus
2
vein
1
adrenal gland
1
blood
1
bodily fluid
1
bone marrow
1
breast
1
bronchus
1
lymphoid tissue
1
mouth
1
ovary
1
pituitary gland
1
prostate gland
1
testis
1
thyroid gland
1
tongue
1
urinary bladder
1
vagina
Project
885
AMP
281
KPMP
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
411
hg19
257
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
1213 results
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Clear Filters
gene expression
accessible chromatin
differential activity
Fine-mapped variants
eQTL
variant allelic effects
target gene predictions
chromatin state
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
15
16
epithelial cell of proximal tubule
15
1
hepatocyte
9
6
glomerular endothelial cell
13
1
pancreatic beta cell
2
5
3
1
1
+ See 213 more…
tissue
retina
1
16
1
kidney
7
9
1
islet of Langerhans
9
4
2
pigmented layer of retina
13
subcutaneous adipose tissue
5
2
1
3
1
+ See 114 more…
in vitro differentiated cells
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
neural progenitor cell
7
+ See 25 more…
cell line
EndoC_BH1
8
1
1
H1-hESC
8
smooth muscle cell of the coronary artery
1
1
HepG2
1
RCC 7860 HIF1a re-expression
1
+ See 4 more…
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