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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1602
candidate regulatory elements
1313
target gene predictions
971
histone modifications
895
accessible chromatin
811
binding sites
124
variant allelic effects
39
chromatin state
13
caQTL
10
eQTL
9
gene expression
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2363
February, 2021
1613
September, 2022
327
November, 2021
301
February, 2024
281
June, 2020
280
May, 2021
135
May, 2020
100
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
44
March, 2020
41
November, 2022
31
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
May, 2019
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5786
bed bed3+
898
tsv
836
bed bed9
543
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5753
Homo sapiens
Biosample type
2095
cell line
1751
tissue
1600
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
558
epithelium
330
connective tissue
310
kidney
309
brain
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
174
heart
168
vasculature
165
skin of body
161
pancreas
large intestine
128
blood vessel
112
extraembryonic component
110
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
47
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5392
AMP
327
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5782
hg19
803
GRCh38
1
hg18
organ_slims!
large intestine
BIOSAMPLE
TYPE
5799 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
gene expression
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 753 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
1
1
brain
29
16
3
2
1
1
muscle of arm
33
16
1
1
+ See 208 more…
primary cell
monocyte
2
86
18
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
2
1
+ See 328 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 103 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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