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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
366
accessible chromatin
9
gene expression
4
variant allelic effects
3
target gene predictions
Date released
222
November, 2021
46
May, 2020
January, 2021
25
February, 2024
21
January, 2020
19
April, 2020
13
August, 2021
13
May, 2021
7
May, 2022
5
October, 2019
4
February, 2021
3
September, 2022
2
November, 2020
1
January, 2022
1
June, 2021
Available data
1539
bed bed3+
589
tsv
382
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
338
Homo sapiens
Biosample type
382
primary cell
120
tissue
12
in vitro differentiated cells
4
cell line
Organ
141
epithelium
45
connective tissue
30
pancreas
22
vasculature
20
liver
18
kidney
14
blood vessel
12
musculature of body
11
intestine
9
lung
8
brain
6
adrenal gland
6
heart
5
eye
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
2
artery
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
bone element
1
bone marrow
1
gonad
1
ovary
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
222
ENCODE
141
AMP
19
LungMap
Genome assembly (visualization)
373
hg19
280
GRCh38
month_released!
January, 2021
BIOSAMPLE
TYPE
382 results
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Clear Filters
accessible chromatin
gene expression
variant allelic effects
target gene predictions
primary cell
monocyte
15
fibroblast
14
endothelial cell
12
excitatory neuron
12
hepatocyte
7
5
macrophage
10
pericyte cell
10
astrocyte
8
pancreatic beta cell
5
1
1
smooth muscle cell
7
B cell
6
endothelial cell of hepatic sinusoid
2
4
pancreatic alpha cell
4
1
1
T cell
5
erythroblast
5
inhibitory neuron
5
pancreatic acinar cell
5
pancreatic delta cell
2
1
1
pancreatic ductal cell
4
skeletal muscle satellite cell
4
type II pneumocyte
4
cardiac fibroblast
3
CD8-positive, alpha-beta T cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
memory B cell
3
osteoblast
3
skeletal muscle fiber
3
type I pneumocyte
3
Muller cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
T-helper 2 cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
gamma-delta T cell
2
glutamatergic neuron
2
hepatic stellate cell
2
keratinocyte
2
luminal epithelial cell of mammary gland
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
mesothelial cell
2
naive B cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
oligodendrocyte precursor cell
2
pancreatic polypeptide-secreting cell
1
1
plasma cell
2
regulatory T cell
2
retinal pigment epithelial cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
type I muscle cell
2
type II muscle cell
2
CD4-positive, alpha-beta T cell
1
adipocyte
1
alveolar macrophage
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
eccrine cell
1
endothelial cell of artery
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
epithelial cell of proximal tubule
1
erythrocyte
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glial cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
goblet cell
1
granular cell of epidermis
1
hepatoblast
1
immature natural killer cell
1
intestinal tuft cell
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
leukocyte
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
megakaryocyte
1
melanocyte
1
mesenchymal stem cell
1
metanephros
1
microglial cell
1
myeloid dendritic cell
1
myoepithelial cell
1
myofibroblast cell
1
naive regulatory T cell
1
naive t cell
1
neuroendocrine cell
1
neuron
1
non keratinizing barrier epithelial cell
1
oligodendrocyte
1
pancreatic endothelial cell
1
pancreatic immune cell
1
pancreatic stellate cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
plasmacytoid dendritic cell
1
proximal tubule cells with injury markers
1
regular atrial cardiac myocyte
1
renal cortical epithelial cell
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
retinal bipolar neuron
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
skeletal muscle myoblast
1
skin fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
thyroid follicular cell
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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