Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
593
gene expression
465
accessible chromatin
142
differential activity
60
Fine-mapped variants
21
eQTL
4
variant allelic effects
3
target gene predictions
2
variant to gene
1
chromatin state
1
representative DNase hypersensitivity sites
Date released
261
September, 2023
190
November, 2021
167
February, 2021
98
May, 2021
92
February, 2024
68
August, 2021
68
January, 2020
67
March, 2020
53
May, 2020
50
March, 2023
41
February, 2020
30
March, 2024
27
January, 2021
19
February, 2023
16
April, 2020
11
November, 2022
10
November, 2019
8
October, 2019
6
May, 2022
4
January, 2022
2
September, 2022
1
January, 2018
1
July, 2020
1
May, 2019
1
September, 2018
Available data
5554
bed bed3+
821
bed bed9
819
tsv
482
bigWig
101
txt
36
bigBed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
1247
Homo sapiens
Biosample type
902
primary cell
283
tissue
83
in vitro differentiated cells
24
cell line
Organ
491
epithelium
287
kidney
133
pancreas
connective tissue
91
vasculature
88
brain
66
blood vessel
51
heart
42
liver
38
eye
31
limb
30
musculature of body
27
adipose tissue
artery
14
bone element
14
intestine
12
embryo
10
lung
8
lymphatic vessel
8
nerve
8
skeleton
7
adrenal gland
7
skin of body
7
stomach
5
large intestine
5
spinal cord
4
esophagus
3
extraembryonic component
3
gonad
3
mammary gland
3
ureter
3
uterus
2
bone marrow
2
bronchus
2
ovary
2
placenta
2
small intestine
2
spleen
2
thyroid gland
2
vein
1
blood
1
bodily fluid
1
breast
1
lymphoid tissue
1
mouth
1
pituitary gland
1
prostate gland
1
testis
1
thymus
1
tongue
1
urinary bladder
1
vagina
Project
798
AMP
261
KPMP
190
ENCODE
27
T1D
16
LungMap
Genome assembly (visualization)
553
hg19
410
GRCh38
organ_slims!
artery
connective tissue
BIOSAMPLE
TYPE
1292 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
differential activity
Fine-mapped variants
eQTL
variant allelic effects
target gene predictions
variant to gene
chromatin state
representative DNase hypersensitivity sites
primary cell
monocyte
15
16
endothelial cell
8
13
epithelial cell of proximal tubule
15
1
hepatocyte
9
7
glomerular endothelial cell
13
1
+ See 268 more…
tissue
retina
1
16
1
kidney
7
9
1
islet of Langerhans
9
4
2
pigmented layer of retina
13
right atrium auricular region
2
2
3
1
+ See 106 more…
in vitro differentiated cells
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
neural progenitor cell
7
+ See 23 more…
cell line
EndoC_BH1
8
1
1
H1-hESC
8
HepG2
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
+ See 3 more…
See all biosamples
Download