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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
394
accessible chromatin
117
gene expression
4
variant allelic effects
3
target gene predictions
Date released
222
November, 2021
87
February, 2021
46
May, 2020
38
August, 2021
28
January, 2021
25
February, 2024
21
January, 2020
19
April, 2020
13
May, 2021
7
May, 2022
5
October, 2019
3
September, 2022
2
November, 2020
1
January, 2022
1
June, 2021
Available data
1595
bed bed3+
591
tsv
410
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
474
Homo sapiens
Biosample type
518
primary cell
120
tissue
12
in vitro differentiated cells
4
cell line
Organ
229
epithelium
105
kidney
53
connective tissue
40
pancreas
24
vasculature
20
liver
14
blood vessel
12
musculature of body
11
intestine
9
lung
8
brain
6
adrenal gland
6
heart
5
eye
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
2
artery
2
bone element
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
gonad
1
ovary
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
249
AMP
222
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
401
hg19
280
GRCh38
BIOSAMPLE
TYPE
518 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
variant allelic effects
target gene predictions
primary cell
endothelial cell
13
3
epithelial cell of proximal tubule
1
15
monocyte
16
fibroblast
14
glomerular endothelial cell
1
13
excitatory neuron
12
hepatocyte
7
5
macrophage
11
1
pericyte cell
10
pancreatic beta cell
7
1
1
astrocyte
8
pancreatic alpha cell
6
1
1
kidney loop of Henle thin ascending limb epithelial cell
7
smooth muscle cell
7
B cell
6
endothelial cell of hepatic sinusoid
2
4
pancreatic acinar cell
6
pancreatic delta cell
4
1
1
CD8-positive, alpha-beta T cell
4
1
T cell
5
erythroblast
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
1
4
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
2
3
pancreatic ductal cell
5
glomerular visceral epithelial cell
1
3
kidney connecting tubule epithelial cell
4
kidney interstitial cell
1
3
memory B cell
4
natural killer cell
3
1
skeletal muscle satellite cell
4
type II pneumocyte
4
cardiac fibroblast
3
T-helper 17 cell
2
1
adult endothelial progenitor cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
endothelial cell of lymphatic vessel
3
enterocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
naive B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
osteoblast
3
pancreatic polypeptide-secreting cell
2
1
regulatory T cell
3
skeletal muscle fiber
3
type I pneumocyte
3
Muller cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 2 cell
2
aortic endothelial cell
2
basal cell
2
blood vessel smooth muscle cell
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
fibroblast of cardiac tissue
2
gabaergic neuron
2
gamma-delta T cell
2
glutamatergic neuron
2
hepatic stellate cell
2
keratinocyte
2
kidney inner medulla collecting duct intercalated cell
2
luminal epithelial cell of mammary gland
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesothelial cell
2
oligodendrocyte precursor cell
2
pancreatic stellate cell
2
plasma cell
2
plasmacytoid dendritic cell
2
renal principal cell
1
1
retinal pigment epithelial cell
2
schwann cell
2
smooth muscle cell of the esophagus
2
type I muscle cell
2
type II muscle cell
2
vascular associated smooth muscle cell
2
B-1 B cell
1
B-2 B cell
1
CD4-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
alternatively activated macrophage
1
alveolar macrophage
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac endothelial cell
1
cardiac muscle cell
1
cholangiocyte
1
choroid plexus epithelial cell
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
conventional dendritic cell
1
dendritic cell
1
eccrine cell
1
effector CD8-positive, alpha-beta T cell
1
endothelial cell of artery
1
endothelial cell of umbilical vein
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
erythrocyte
1
extravillous trophoblast
1
fetal thymocyte
1
foveolar cell of stomach
1
gastric goblet cell
1
glial cell
1
goblet cell
1
granular cell of epidermis
1
hepatoblast
1
immature natural killer cell
1
inflammatory macrophage
1
intestinal tuft cell
1
islet of Langerhans
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
kidney tubule cell
1
leukocyte
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mammary gland epithelial cell
1
mast cell
1
mature NK T cell
1
melanocyte
1
mesenchymal stem cell
1
metanephros
1
microglial cell
1
myeloid dendritic cell
1
myoepithelial cell
1
myofibroblast cell
1
naive regulatory T cell
1
naive t cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
natural killer cell mediated cytotoxicity
1
neuroendocrine cell
1
neuron
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
pancreatic endothelial cell
1
pancreatic immune cell
1
paneth cell
1
parietal cell
1
parietal epithelial cell
1
peptic cell
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
proximal tubule cells with injury markers
1
regular atrial cardiac myocyte
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal cortical epithelial cell
1
renal intercalated cell
1
respiratory goblet cell
1
retinal bipolar neuron
1
skeletal muscle cell
1
skeletal muscle fibroblast
1
skeletal muscle myoblast
1
skin fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the brain vasculature
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
thyroid follicular cell
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
ureteric bud
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
See all biosamples
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