Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
49
candidate regulatory elements
45
target gene predictions
29
gene expression
27
chromatin state
21
binding sites
12
differential activity
12
histone modifications
11
variant allelic effects
4
eQTL
2
caQTL
Date released
75
September, 2022
56
February, 2021
50
November, 2021
15
September, 2023
13
February, 2024
12
October, 2022
11
June, 2020
7
March, 2023
May, 2021
5
February, 2020
5
January, 2020
5
May, 2020
3
April, 2020
3
January, 2022
3
May, 2022
3
November, 2020
2
January, 2021
1
August, 2017
1
August, 2018
1
August, 2021
1
February, 2023
1
June, 2021
1
October, 2019
Available data
203
bed bed3+
46
bigWig
33
tsv
26
bed bed9
7
txt
1
bigBed bed9
1
bigBed narrowPeak
Organism
274
Homo sapiens
Biosample type
274
primary cell
92
tissue
44
in vitro differentiated cells
31
cell line
1
stem cell
Organ
803
epithelium
309
kidney
274
connective tissue
167
vasculature
114
pancreas
112
blood vessel
96
skin of body
62
liver
50
musculature of body
45
mammary gland
40
penis
39
extraembryonic component
35
brain
33
lung
30
heart
28
artery
23
eye
23
intestine
21
embryo
19
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
9
blood
9
bodily fluid
9
prostate gland
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
pericardium
1
testis
1
thymus
Project
204
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
Genome assembly (visualization)
230
hg19
90
GRCh38
month_released!
May, 2021
BIOSAMPLE
TYPE
274 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
binding sites
differential activity
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
1
10
1
osteoblast
5
2
1
2
1
3
2
fibroblast of lung
6
3
4
2
foreskin fibroblast
1
6
1
1
4
2
fibroblast of cardiac tissue
2
3
4
3
fibroblast of dermis
4
3
3
1
hepatic stellate cell
3
1
1
1
1
1
1
skin fibroblast
2
2
3
2
fibroblast of mammary gland
1
2
1
1
2
1
fibroblast of pulmonary artery
1
2
1
1
2
1
fibroblast of villous mesenchyme
1
2
1
1
2
1
pancreatic stellate cell
2
1
2
3
mesangial cell
2
5
mesenchymal stem cell
2
1
1
1
1
1
cardiac fibroblast
3
2
Adaptive / Maladaptive / Repairing Fibroblast
3
2
Fibroblast
3
2
Mesangial Cell
3
2
fibroblast of peridontal ligament
1
2
1
1
fibroblast of the aortic adventitia
2
1
1
1
adipocyte
2
1
1
adult endothelial progenitor cell
1
3
cardiac fibroblast
3
1
fibroblast of gingiva
2
1
1
fibroblast of the conjunctiva
2
1
1
preadipocyte
1
1
2
stromal cell of bone marrow
2
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
brain pericyte
1
1
1
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
1
1
1
columnar chondrocyte
1
1
extracellular matrix secreting cell
2
fat cell
1
1
luteal cell
1
1
stromal cell
1
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
See all biosamples
Download