Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1328
candidate regulatory elements
977
target gene predictions
767
histone modifications
733
chromatin state
716
binding sites
427
accessible chromatin
204
gene expression
124
eQTL
74
Fine-mapped variants
59
variant allelic effects
15
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
667
September, 2022
29
August, 2017
9
May, 2019
April, 2019
7
May, 2022
5
February, 2024
5
May, 2021
4
January, 2020
3
May, 2020
3
October, 2019
1
November, 2019
Available data
692
bed bed9
33
bed bed3+
29
bigBed bed9
7
bed bed9+
2
bigWig
1
bam
Organism
733
Homo sapiens
Biosample type
497
tissue
primary cell
191
cell line
44
in vitro differentiated cells
1
stem cell
Organ
71
musculature of body
68
brain
67
kidney
66
lung
59
intestine
50
limb
42
heart
36
large intestine
27
bodily fluid
25
blood
25
extraembryonic component
24
embryo
24
stomach
21
connective tissue
20
small intestine
17
skin of body
16
blood vessel
16
pancreas
16
vasculature
15
liver
15
placenta
14
adrenal gland
13
bone element
13
ureter
11
prostate gland
11
thymus
10
adipose tissue
8
gonad
8
lymph node
7
mammary gland
7
spinal cord
6
artery
6
epithelium
6
esophagus
6
eye
spleen
5
lymphoid tissue
4
nerve
4
ovary
4
penis
4
testis
4
thyroid gland
4
uterus
3
mouth
3
skeleton
2
breast
2
tongue
2
urinary bladder
2
vagina
1
nose
Project
733
AMP
Genome assembly (visualization)
733
hg19
692
GRCh38
month_released!
April, 2019
organ_slims!
spleen
biosample_type!
primary cell
BIOSAMPLE
TYPE
733 results
search-icon
table-tab-icon
Clear Filters
chromatin state
tissue
heart
20
stomach
19
brain
18
lung
16
muscle of arm
16
+ See 108 more…
cell line
A549
18
K562
7
MCF-7
5
HeLa-S3
3
endometrium adenocarcinoma
3
+ See 143 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
adipocyte
6
embryonic stem cell
5
neural progenitor cell
4
endodermal cell
2
+ See 15 more…
stem cell
H1-hESC
1
See all biosamples
Download