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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
214
accessible chromatin
177
target gene predictions
143
candidate regulatory elements
91
differential activity
88
binding sites
78
chromatin state
52
histone modifications
41
variant allelic effects
5
eQTL
1
caQTL
Date released
266
February, 2021
220
September, 2022
155
September, 2023
127
November, 2021
104
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
25
August, 2021
25
October, 2022
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
717
bed bed3+
324
tsv
169
bigWig
78
txt
73
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1144
Homo sapiens
Biosample type
827
primary cell
237
cell line
54
tissue
26
in vitro differentiated cells
Organ
937
epithelium
651
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
262
vasculature
246
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
833
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
796
hg19
284
GRCh38
month_released!
April, 2019
February, 2023
BIOSAMPLE
TYPE
1144 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
binding sites
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
1
hepatocyte
13
8
3
1
1
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
2
5
1
+ See 148 more…
cell line
K562
1
23
7
2
7
1
EndoC_BH1
8
8
1
2
1
GM12878
1
8
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
1
2
1
2
1
1
+ See 34 more…
tissue
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pigmented layer of retina
10
blood
2
kidney epithelium
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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