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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
116
candidate regulatory elements
107
target gene predictions
75
chromatin state
73
binding sites
66
accessible chromatin
55
gene expression
46
histone modifications
19
differential activity
19
variant allelic effects
16
eQTL
12
Fine-mapped variants
4
caQTL
Date released
190
September, 2022
145
February, 2021
60
February, 2024
35
September, 2023
24
October, 2022
23
June, 2020
22
March, 2020
19
January, 2020
18
May, 2020
13
August, 2021
10
May, 2021
9
November, 2021
7
February, 2020
6
August, 2017
4
February, 2023
4
January, 2022
4
March, 2023
4
November, 2019
3
April, 2020
2
May, 2022
2
October, 2019
1
July, 2020
1
March, 2024
1
May, 2019
1
September, 2018
Available data
433
bed bed3+
84
tsv
69
bed bed9
48
bigWig
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
608
Homo sapiens
Biosample type
234
cell line
221
primary cell
144
tissue
9
in vitro differentiated cells
Organ
949
epithelium
651
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
249
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
561
AMP
35
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
522
hg19
182
GRCh38
2
hg18
month_released!
April, 2019
BIOSAMPLE
TYPE
608 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
cell line
K562
7
23
7
2
1
1
HepG2
2
3
2
3
2
5
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
+ See 31 more…
primary cell
hepatocyte
1
3
1
1
8
13
4
2
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
6
4
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
1
1
1
3
1
1
1
+ See 32 more…
tissue
liver
13
10
9
1
4
1
2
1
7
1
coronary artery
3
3
3
3
1
2
2
3
1
tibial artery
3
2
3
3
1
2
2
3
ascending aorta
4
2
3
1
1
1
1
3
aorta
4
4
4
1
+ See 7 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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