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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
226
gene expression
182
candidate regulatory elements
96
target gene predictions
93
chromatin state
74
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
20
variant allelic effects
12
eQTL
3
Fine-mapped variants
1
caQTL
Date released
271
September, 2022
214
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
20
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
May, 2021
3
October, 2022
2
January, 2022
2
March, 2024
2
May, 2022
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
410
bed bed3+
279
tsv
90
bed bed9
87
txt
59
bigWig
3
csv
2
bigBed bed9
1
bam
Organism
807
Homo sapiens
Biosample type
372
primary cell
358
tissue
69
cell line
8
in vitro differentiated cells
Organ
949
epithelium
651
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
249
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
659
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
510
hg19
164
GRCh38
2
hg18
month_released!
April, 2019
BIOSAMPLE
TYPE
807 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
1
3
1
8
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 68 more…
tissue
kidney
7
29
14
15
10
1
2
1
1
liver
1
13
10
9
4
1
1
2
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 17 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 11 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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