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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
131
target gene predictions
117
candidate regulatory elements
92
differential activity
61
chromatin state
49
binding sites
41
variant allelic effects
32
histone modifications
3
eQTL
2
caQTL
Date released
213
February, 2021
175
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
35
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
8
October, 2022
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
May, 2022
1
July, 2020
1
November, 2019
Available data
583
bed bed3+
324
tsv
175
bigWig
78
txt
58
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
993
Homo sapiens
Biosample type
825
primary cell
79
cell line
63
tissue
26
in vitro differentiated cells
Organ
947
epithelium
651
kidney
466
brain
457
connective tissue
372
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
249
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
154
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
88
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
682
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
644
hg19
241
GRCh38
month_released!
April, 2019
May, 2022
BIOSAMPLE
TYPE
993 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
13
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 147 more…
cell line
MCF-7
1
6
9
5
3
2
EndoC_BH1
8
8
1
3
1
T47D
2
3
2
keratinocyte
3
1
MCF 10A
3
+ See 9 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
mammary gland
1
1
+ See 16 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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