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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
212
accessible chromatin
105
target gene predictions
92
differential activity
89
binding sites
74
candidate regulatory elements
52
histone modifications
41
variant allelic effects
7
chromatin state
5
eQTL
2
caQTL
1
pQTL
Date released
270
February, 2021
September, 2022
155
September, 2023
127
November, 2021
104
February, 2024
38
March, 2023
38
May, 2021
37
June, 2020
26
August, 2021
25
October, 2022
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
April, 2020
6
August, 2018
6
March, 2020
5
August, 2017
5
October, 2019
3
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
577
bed bed3+
325
tsv
166
bigWig
78
txt
13
bigBed narrowPeak
6
csv
2
bed bed9
2
bigBed bed9
Organism
934
Homo sapiens
Biosample type
688
primary cell
170
cell line
53
tissue
23
in vitro differentiated cells
Organ
791
epithelium
427
kidney
337
connective tissue
286
brain
233
pancreas
188
vasculature
171
musculature of body
147
heart
143
bodily fluid
142
blood vessel
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
98
lung
82
eye
76
large intestine
71
uterus
65
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
14
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
9
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
630
AMP
155
KPMP
127
ENCODE
20
T1D
2
community
Genome assembly (visualization)
584
hg19
213
GRCh38
month_released!
April, 2020
September, 2022
BIOSAMPLE
TYPE
934 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
differential activity
binding sites
candidate regulatory elements
histone modifications
variant allelic effects
chromatin state
eQTL
caQTL
pQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
2
1
4
2
epithelial cell of proximal tubule
16
1
1
1
1
pancreatic ductal cell
3
6
3
3
1
2
1
glomerular endothelial cell
14
2
1
1
+ See 143 more…
cell line
K562
1
17
2
1
1
1
EndoC_BH1
8
8
1
3
1
GM12878
1
7
2
1
1
1
GM06990
1
2
1
1
GM19240
1
1
2
1
+ See 36 more…
tissue
pigmented layer of retina
20
breast epithelium
1
1
3
esophagus squamous epithelium
1
4
blood
2
kidney epithelium
1
1
+ See 18 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 4 more…
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