Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
candidate regulatory elements
4
binding sites
4
chromatin state
3
accessible chromatin
2
gene expression
2
histone modifications
1
eQTL
Date released
51
February, 2024
8
September, 2022
5
February, 2021
2
June, 2020
2
March, 2024
2
May, 2021
2
November, 2021
1
January, 2022
1
October, 2022
Available data
67
bed bed3+
4
bed bed9
2
tsv
1
bigWig
Organism
74
Homo sapiens
Biosample type
59
cell line
10
tissue
5
primary cell
Organ
832
epithelium
479
kidney
363
connective tissue
320
brain
246
pancreas
221
musculature of body
199
vasculature
179
lung
173
heart
172
intestine
169
bodily fluid
162
blood
157
embryo
153
blood vessel
143
limb
128
skin of body
127
liver
102
large intestine
89
eye
87
extraembryonic component
74
uterus
67
stomach
64
adipose tissue
64
bone element
61
artery
58
mammary gland
51
prostate gland
46
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
30
ureter
29
thymus
28
esophagus
26
spinal cord
19
spleen
18
nerve
17
lymphatic vessel
17
testis
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
14
vein
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
72
AMP
2
ENCODE
Genome assembly (visualization)
71
hg19
58
GRCh38
month_released!
August, 2017
January, 2020
annotation_type!
candidate regulatory elements
BIOSAMPLE
TYPE
74 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
binding sites
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
cell line
HeLa-S3
55
1
3
tissue
uterus
2
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
Download