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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
249
gene expression
212
accessible chromatin
120
target gene predictions
100
candidate regulatory elements
92
differential activity
50
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
March, 2020
6
October, 2022
5
October, 2019
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
542
bed bed3+
324
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
940
Homo sapiens
Biosample type
811
primary cell
61
tissue
42
cell line
26
in vitro differentiated cells
Organ
940
epithelium
649
kidney
442
connective tissue
422
brain
363
musculature of body
309
lung
283
intestine
265
pancreas
253
vasculature
240
heart
235
limb
216
bodily fluid
213
embryo
205
blood
203
skin of body
191
blood vessel
170
large intestine
146
extraembryonic component
143
liver
117
stomach
109
eye
89
bone element
86
mammary gland
83
uterus
82
small intestine
79
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
629
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
595
hg19
234
GRCh38
month_released!
August, 2017
March, 2020
BIOSAMPLE
TYPE
940 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
9
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 146 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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