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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
33
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
August, 2017
3
February, 2024
2
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
33
bed bed9
3
bigWig
Organism
169
Homo sapiens
Biosample type
129
tissue
34
cell line
6
primary cell
Organ
943
epithelium
650
kidney
458
brain
453
connective tissue
370
musculature of body
309
lung
282
intestine
272
pancreas
261
vasculature
252
heart
241
limb
215
bodily fluid
214
embryo
204
blood
201
skin of body
199
blood vessel
169
large intestine
152
liver
146
extraembryonic component
116
stomach
109
eye
89
bone element
87
adipose tissue
86
mammary gland
83
small intestine
81
uterus
77
prostate gland
73
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
32
spleen
25
testis
24
nerve
23
lymphoid tissue
22
ovary
22
thyroid gland
21
lymphatic vessel
21
vein
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
163
AMP
6
ENCODE
Genome assembly (visualization)
167
hg19
43
GRCh38
month_released!
August, 2017
November, 2019
March, 2024
BIOSAMPLE
TYPE
169 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
2
1
mucosa of rectum
4
2
2
+ See 5 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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