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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
241
accessible chromatin
129
target gene predictions
114
candidate regulatory elements
92
differential activity
57
chromatin state
47
binding sites
42
variant allelic effects
30
histone modifications
4
eQTL
2
caQTL
Date released
208
February, 2021
172
September, 2022
155
September, 2023
130
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
29
June, 2020
26
February, 2023
23
August, 2021
22
November, 2022
20
January, 2021
16
May, 2020
15
January, 2020
11
February, 2020
7
April, 2020
7
October, 2022
6
August, 2018
6
March, 2020
5
October, 2019
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
601
bed bed3+
326
tsv
195
bigWig
78
txt
57
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1012
Homo sapiens
Biosample type
823
primary cell
110
tissue
53
cell line
26
in vitro differentiated cells
Organ
946
epithelium
652
kidney
460
brain
451
connective tissue
372
musculature of body
310
lung
285
intestine
274
pancreas
265
vasculature
255
heart
244
limb
216
bodily fluid
214
embryo
205
blood
203
blood vessel
203
skin of body
171
large intestine
153
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
adipose tissue
86
mammary gland
83
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
698
AMP
155
KPMP
130
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
661
hg19
246
GRCh38
month_released!
August, 2017
BIOSAMPLE
TYPE
1012 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
4
2
1
+ See 149 more…
tissue
retina
1
23
3
6
3
1
1
1
1
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
eye
1
2
4
2
+ See 17 more…
cell line
EndoC_BH1
8
8
1
3
1
WERI-Rb-1
1
1
2
1
2
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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