Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
54
candidate regulatory elements
34
target gene predictions
27
chromatin state
8
accessible chromatin
4
eQTL
3
binding sites
2
gene expression
1
histone modifications
Date released
81
September, 2022
30
February, 2021
6
November, 2021
5
June, 2020
4
January, 2022
2
March, 2020
2
March, 2024
2
May, 2021
August, 2017
1
October, 2022
Available data
100
bed bed3+
27
bed bed9
3
bigWig
2
tsv
Organism
133
Homo sapiens
Biosample type
118
tissue
8
primary cell
7
cell line
Organ
946
epithelium
652
kidney
460
brain
453
connective tissue
372
musculature of body
310
lung
285
intestine
274
pancreas
265
vasculature
255
heart
244
limb
216
bodily fluid
214
embryo
205
blood
203
blood vessel
203
skin of body
171
large intestine
153
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
87
adipose tissue
86
mammary gland
83
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
127
AMP
6
ENCODE
Genome assembly (visualization)
127
hg19
37
GRCh38
month_released!
August, 2017
organ_slims!
ureter
BIOSAMPLE
TYPE
133 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
binding sites
gene expression
histone modifications
tissue
small intestine
29
17
15
1
1
ovary
8
6
4
1
1
1
testis
7
3
3
1
1
1
1
1
duodenal mucosa
4
2
2
muscle layer of duodenum
4
2
2
primary cell
enterocyte of epithelium of small intestine
1
1
luteal cell
1
1
small intestine goblet cell
1
1
Leydig cell
1
somatic gonadal cell
1
cell line
NT2-D1 cell
1
1
1
1
2
NT2/D1
1
Download