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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
960
histone modifications
883
accessible chromatin
816
binding sites
551
gene expression
167
differential activity
142
eQTL
140
variant allelic effects
75
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
2507
February, 2021
1678
September, 2022
384
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
March, 2020
106
January, 2022
August, 2021
101
October, 2022
83
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5871
bed bed3+
bed bed9
849
tsv
526
bigWig
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
6821
Homo sapiens
Biosample type
2180
primary cell
2164
cell line
2120
tissue
399
in vitro differentiated cells
4
stem cell
Organ
810
epithelium
472
kidney
400
brain
400
connective tissue
303
musculature of body
256
pancreas
241
lung
234
intestine
231
vasculature
201
heart
194
limb
190
bodily fluid
182
blood
180
embryo
176
blood vessel
170
skin of body
141
large intestine
132
liver
113
extraembryonic component
100
eye
96
stomach
79
uterus
75
adipose tissue
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6167
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
Genome assembly (visualization)
6021
hg19
974
GRCh38
month_released!
August, 2021
files.file_type!
txt
bed bed9
BIOSAMPLE
TYPE
6869 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
2
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
14
2
6
1
2
2
B cell
14
10
6
2
+ See 415 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 765 more…
tissue
heart
37
20
1
5
1
2
2
stomach
40
21
1
3
1
1
kidney
29
14
2
3
1
7
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 254 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
neural progenitor cell
5
5
1
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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