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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
954
histone modifications
867
accessible chromatin
839
candidate regulatory elements
816
binding sites
523
target gene predictions
124
variant allelic effects
40
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
variant to gene
Date released
2409
February, 2021
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
4193
bed bed3+
851
tsv
522
bigWig
83
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4147
Homo sapiens
Biosample type
1761
cell line
1252
primary cell
920
tissue
254
in vitro differentiated cells
4
stem cell
Organ
433
epithelium
248
connective tissue
189
brain
145
musculature of body
143
kidney
139
bodily fluid
135
blood
127
pancreas
124
embryo
119
intestine
112
vasculature
101
heart
99
lung
97
skin of body
83
limb
82
blood vessel
80
eye
72
large intestine
68
uterus
65
liver
47
stomach
46
extraembryonic component
45
mammary gland
42
bone element
38
lymph node
37
prostate gland
34
penis
32
adipose tissue
31
artery
29
adrenal gland
26
small intestine
25
ureter
24
placenta
21
gonad
19
esophagus
16
thymus
14
spleen
13
spinal cord
13
vein
11
pituitary gland
11
testis
10
bronchus
10
lymphatic vessel
9
bone marrow
9
ovary
9
skeleton
9
thyroid gland
8
lymphoid tissue
8
nerve
5
breast
5
mouth
5
trachea
3
tongue
3
urinary bladder
2
vagina
1
nose
Project
3781
AMP
333
ENCODE
60
T1D
19
LungMap
Genome assembly (visualization)
4186
hg19
761
GRCh38
month_released!
August, 2021
September, 2022
BIOSAMPLE
TYPE
4193 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
target gene predictions
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
variant to gene
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
K562
1
1
1
2
17
1
breast cancer cell
11
9
HFFc6
19
+ See 741 more…
primary cell
monocyte
86
18
1
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
5
endothelial cell
1
14
2
7
2
2
1
fibroblast
16
1
4
6
CD14-positive monocyte
4
15
+ See 310 more…
tissue
retina
1
23
3
1
1
heart
1
5
18
1
1
2
stomach
1
3
21
2
kidney
2
3
15
1
1
brain
3
2
13
1
1
+ See 211 more…
in vitro differentiated cells
adipocyte
1
4
2
1
4
4
hematopoietic multipotent progenitor cell
1
1
9
1
T-cell acute lymphoblastic leukemia
5
3
embryonic stem cell
1
5
1
1
neuroblastoma cell line
6
2
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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