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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
208
accessible chromatin
168
candidate regulatory elements
162
target gene predictions
49
binding sites
38
variant allelic effects
30
histone modifications
6
chromatin state
2
caQTL
2
eQTL
Date released
166
September, 2022
157
February, 2021
127
November, 2021
61
February, 2024
31
June, 2020
22
May, 2021
20
January, 2021
15
November, 2022
12
January, 2020
12
May, 2020
August, 2021
11
February, 2023
7
April, 2020
7
October, 2022
6
August, 2017
5
October, 2019
3
March, 2020
2
May, 2022
1
November, 2019
Available data
665
bed bed3+
314
tsv
168
bigWig
82
bed bed9
66
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
665
Homo sapiens
Biosample type
434
primary cell
155
tissue
59
cell line
17
in vitro differentiated cells
Organ
536
epithelium
328
connective tissue
309
brain
293
kidney
281
musculature of body
239
lung
228
intestine
189
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
158
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
98
eye
97
liver
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
48
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
511
AMP
127
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
664
hg19
174
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
665 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
eQTL
primary cell
endothelial cell
14
7
2
2
1
2
1
hepatocyte
8
1
3
1
2
1
endothelial cell of umbilical vein
2
6
4
2
1
foreskin keratinocyte
11
4
keratinocyte
2
3
5
1
1
2
1
+ See 88 more…
tissue
large intestine
1
27
14
1
pigmented layer of retina
20
sigmoid colon
1
10
7
transverse colon
1
8
5
breast epithelium
1
5
3
+ See 21 more…
cell line
EndoC_BH1
8
1
1
HT-29
1
2
2
1
1
SW480
1
2
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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