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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
65
target gene predictions
48
chromatin state
45
gene expression
31
binding sites
25
histone modifications
16
variant allelic effects
14
differential activity
13
eQTL
6
Fine-mapped variants
2
caQTL
Date released
120
September, 2022
109
February, 2021
50
November, 2021
20
June, 2020
18
February, 2024
17
September, 2023
May, 2021
12
October, 2022
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
315
bed bed3+
61
tsv
55
bigWig
41
bed bed9
6
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
433
Homo sapiens
Biosample type
275
primary cell
82
tissue
44
in vitro differentiated cells
31
cell line
1
stem cell
Organ
892
epithelium
624
kidney
455
brain
433
connective tissue
368
musculature of body
307
lung
283
intestine
262
vasculature
243
heart
241
limb
236
pancreas
211
bodily fluid
201
blood
200
blood vessel
200
embryo
199
skin of body
169
large intestine
143
extraembryonic component
143
liver
117
stomach
109
eye
89
bone element
85
mammary gland
83
small intestine
81
uterus
80
adipose tissue
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
361
AMP
50
ENCODE
15
KPMP
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
366
hg19
122
GRCh38
month_released!
August, 2021
May, 2021
BIOSAMPLE
TYPE
433 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
differential activity
eQTL
Fine-mapped variants
caQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
1
10
1
osteoblast
5
2
1
1
2
3
2
fibroblast of lung
6
3
4
2
foreskin fibroblast
1
6
1
1
4
2
+ See 40 more…
tissue
adipose tissue
2
7
7
6
3
1
1
2
subcutaneous adipose tissue
2
2
1
5
1
1
3
3
omental fat pad
2
5
2
2
2
1
3
subcutaneous abdominal adipose tissue
5
1
bone tissue
4
+ See 4 more…
in vitro differentiated cells
adipocyte
4
4
2
6
1
1
1
mesenchymal stem cell
1
3
2
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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