Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
candidate regulatory elements
181
target gene predictions
154
accessible chromatin
149
chromatin state
102
gene expression
79
histone modifications
62
binding sites
51
Fine-mapped variants
48
eQTL
41
variant allelic effects
32
differential activity
4
caQTL
Date released
363
September, 2022
259
February, 2021
59
March, 2020
56
November, 2021
55
September, 2023
46
January, 2020
44
June, 2020
37
May, 2020
36
February, 2024
32
February, 2020
30
May, 2021
27
January, 2022
18
October, 2022
14
August, 2017
August, 2021
11
March, 2023
7
November, 2022
6
April, 2020
5
May, 2019
4
February, 2023
4
November, 2019
4
October, 2019
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
759
bed bed3+
194
tsv
135
bed bed9
98
bigWig
16
bigBed bed9
8
txt
1
bigBed narrowPeak
Organism
1134
Homo sapiens
Biosample type
517
tissue
445
primary cell
115
cell line
56
in vitro differentiated cells
2
stem cell
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1019
AMP
56
ENCODE
50
KPMP
6
LungMap
2
T1D
2
community
Genome assembly (visualization)
962
hg19
347
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1135 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
binding sites
Fine-mapped variants
eQTL
variant allelic effects
differential activity
caQTL
tissue
brain
29
16
2
18
1
3
1
2
1
adipose tissue
7
8
2
6
3
1
2
1
caudate nucleus
5
3
2
4
1
1
3
2
1
coronary artery
3
3
3
3
1
3
2
2
1
tibial artery
3
2
3
3
1
3
2
2
+ See 76 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
2
3
endothelial cell of hepatic sinusoid
6
4
6
+ See 74 more…
cell line
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 23 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 12 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download