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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
239
candidate regulatory elements
238
gene expression
153
target gene predictions
125
chromatin state
123
accessible chromatin
70
differential activity
38
binding sites
32
variant allelic effects
31
histone modifications
16
eQTL
6
Fine-mapped variants
2
caQTL
Date released
345
September, 2022
297
February, 2021
157
September, 2023
53
November, 2021
August, 2021
35
June, 2020
29
May, 2020
24
January, 2020
19
February, 2024
18
February, 2020
16
May, 2021
14
October, 2022
12
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
April, 2019
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
621
bed bed3+
303
tsv
118
bed bed9
81
txt
76
bigWig
4
bigBed bed9
1
bigBed narrowPeak
Organism
1073
Homo sapiens
Biosample type
571
primary cell
378
tissue
72
cell line
51
in vitro differentiated cells
1
stem cell
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
858
AMP
155
KPMP
53
ENCODE
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
750
hg19
220
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1073 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
fibroblast
4
16
1
6
2
epithelial cell of proximal tubule
2
15
1
1
1
1
1
pericyte cell
1
10
1
10
glomerular endothelial cell
2
13
1
1
2
1
osteoblast
2
2
2
1
5
3
2
+ See 99 more…
tissue
kidney
29
7
14
16
3
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 26 more…
cell line
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
1
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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