Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
148
candidate regulatory elements
83
target gene predictions
76
chromatin state
24
accessible chromatin
11
gene expression
9
binding sites
9
histone modifications
7
variant allelic effects
6
Fine-mapped variants
6
eQTL
2
caQTL
1
differential activity
Date released
207
September, 2022
97
February, 2021
15
February, 2024
12
November, 2021
9
March, 2020
6
February, 2020
6
June, 2020
6
May, 2020
6
May, 2021
January, 2020
4
May, 2022
3
August, 2017
3
October, 2022
2
January, 2021
2
March, 2024
2
May, 2019
August, 2021
1
January, 2022
1
October, 2019
Available data
287
bed bed3+
72
bed bed9
14
tsv
13
bigWig
3
bigBed bed9
1
bed bed9+
Organism
382
Homo sapiens
Biosample type
301
tissue
62
primary cell
17
cell line
2
in vitro differentiated cells
Organ
912
epithelium
610
kidney
439
connective tissue
437
brain
369
musculature of body
311
lung
289
intestine
265
pancreas
249
vasculature
237
limb
235
heart
215
bodily fluid
207
embryo
205
blood
204
skin of body
192
blood vessel
174
large intestine
146
extraembryonic component
143
liver
119
stomach
107
eye
89
bone element
87
mammary gland
84
small intestine
83
uterus
79
adipose tissue
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
368
AMP
12
ENCODE
2
T1D
Genome assembly (visualization)
374
hg19
93
GRCh38
month_released!
August, 2021
January, 2020
BIOSAMPLE
TYPE
382 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
eQTL
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
muscle of leg
27
14
15
1
muscle of back
28
13
13
psoas muscle
7
8
4
1
gastrocnemius medialis
8
5
4
1
+ See 18 more…
primary cell
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
type II muscle cell
1
3
1
1
1
skeletal muscle cell
2
1
1
1
+ See 9 more…
cell line
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
in vitro differentiated cells
myotube
1
1
See all biosamples
Download