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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1295
target gene predictions
976
histone modifications
849
accessible chromatin
816
binding sites
61
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
1
sQTL
1
variant to gene
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
August, 2022
1
June, 2021
Available data
5742
bed bed3+
866
bed bed9
821
tsv
493
bigWig
108
txt
37
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5741
Homo sapiens
Biosample type
2119
cell line
1774
tissue
1513
primary cell
332
in vitro differentiated cells
2
stem cell
Organ
533
epithelium
318
connective tissue
295
brain
295
kidney
273
musculature of body
238
lung
226
intestine
190
bodily fluid
181
blood
177
embryo
167
limb
165
skin of body
157
heart
149
pancreas
148
vasculature
136
large intestine
112
blood vessel
112
extraembryonic component
96
eye
96
liver
92
stomach
76
uterus
73
mammary gland
69
bone element
63
prostate gland
63
small intestine
56
adrenal gland
56
placenta
54
lymph node
54
penis
48
ureter
44
adipose tissue
42
artery
36
gonad
36
thymus
32
esophagus
29
spinal cord
25
spleen
19
testis
18
lymphoid tissue
17
thyroid gland
16
ovary
15
skeleton
15
vein
14
bronchus
14
lymphatic vessel
13
mouth
12
nerve
11
pituitary gland
10
bone marrow
9
breast
7
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
Project
5329
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5734
hg19
792
GRCh38
1
hg18
month_released!
August, 2022
May, 2020
March, 2020
BIOSAMPLE
TYPE
5742 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
sQTL
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 760 more…
tissue
stomach
40
21
1
3
heart
37
19
1
5
1
kidney
29
14
2
10
1
1
brain
29
16
3
2
1
muscle of arm
33
16
1
+ See 210 more…
primary cell
monocyte
1
86
16
1
1
1
CD8-positive, alpha-beta T cell
7
4
30
2
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
2
2
1
B cell
14
9
4
+ See 310 more…
in vitro differentiated cells
neural progenitor cell
5
4
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 97 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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