Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
38
accessible chromatin
30
differential activity
24
gene expression
24
target gene predictions
7
variant allelic effects
5
histone modifications
4
candidate regulatory elements
3
binding sites
Date released
39
March, 2023
20
January, 2021
18
November, 2021
15
February, 2021
12
February, 2024
12
May, 2021
7
August, 2018
5
October, 2019
4
September, 2022
2
June, 2020
1
June, 2021
Available data
79
bed bed3+
47
tsv
40
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
135
Homo sapiens
Biosample type
229
cell line
135
primary cell
115
tissue
3
in vitro differentiated cells
Organ
811
epithelium
302
kidney
278
connective tissue
167
vasculature
126
pancreas
112
blood vessel
100
skin of body
63
liver
49
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
27
artery
27
heart
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
limb
1
testis
1
thymus
Project
97
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
81
hg19
23
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
135 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
differential activity
gene expression
target gene predictions
variant allelic effects
histone modifications
candidate regulatory elements
binding sites
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
3
4
1
pancreatic stellate cell
2
3
2
1
pancreatic polypeptide-secreting cell
2
2
1
1
peripheral blood mononuclear cell
1
4
1
pancreatic alpha+beta cell
3
1
pancreatic cycling alpha cell
3
1
pancreatic gamma+epsilon cell
3
1
pancreatic A cell
3
pancreatic quiescent stellate cell
3
peripheral blood stem cell
1
1
1
type B pancreatic cell
3
pancreatic endocrine cell
1
1
activated pancreatic stellate cell
1
islet of Langerhans
1
quiescent pancreatic stellate cell
1
See all biosamples
Download