Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
55
target gene predictions
45
binding sites
43
candidate regulatory elements
25
chromatin state
24
histone modifications
12
accessible chromatin
2
eQTL
1
gene expression
Date released
70
February, 2021
69
September, 2022
28
February, 2024
19
October, 2022
12
June, 2020
4
May, 2021
2
August, 2017
2
August, 2021
1
March, 2024
Available data
181
bed bed3+
23
bed bed9
1
tsv
Organism
207
Homo sapiens
Biosample type
195
cell line
9
primary cell
3
tissue
Organ
764
epithelium
607
kidney
427
brain
396
connective tissue
353
musculature of body
302
lung
278
intestine
230
vasculature
224
limb
222
heart
218
bodily fluid
218
pancreas
213
embryo
207
blood
199
skin of body
176
blood vessel
171
large intestine
143
extraembryonic component
131
liver
114
stomach
84
mammary gland
82
small intestine
82
uterus
79
adipose tissue
79
bone element
78
prostate gland
71
eye
71
placenta
67
adrenal gland
64
penis
62
artery
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
nerve
19
mouth
18
lymphatic vessel
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
207
AMP
Genome assembly (visualization)
206
hg19
51
GRCh38
month_released!
February, 2020
files.file_type!
bigWig
organ_slims!
spinal cord
BIOSAMPLE
TYPE
207 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
binding sites
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
23
2
7
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
2
1
1
1
1
HAP-1
2
1
2
1
1
1
+ See 23 more…
primary cell
peripheral blood mononuclear cell
1
4
1
peripheral blood stem cell
1
1
1
tissue
blood
2
whole blood
1
See all biosamples
Download