Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
127
candidate regulatory elements
117
target gene predictions
77
binding sites
75
chromatin state
68
accessible chromatin
50
histone modifications
43
gene expression
21
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
3
pQTL
2
caQTL
Date released
195
September, 2022
183
February, 2021
November, 2021
46
February, 2024
32
June, 2020
31
October, 2022
20
May, 2021
17
September, 2023
14
August, 2021
10
January, 2020
10
May, 2020
9
August, 2017
February, 2020
9
March, 2020
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
470
bed bed3+
66
bed bed9
62
tsv
23
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
619
Homo sapiens
Biosample type
237
primary cell
236
cell line
95
tissue
50
in vitro differentiated cells
1
stem cell
Organ
813
epithelium
640
kidney
448
brain
401
connective tissue
358
musculature of body
302
lung
270
intestine
257
pancreas
255
vasculature
238
limb
234
heart
218
bodily fluid
213
embryo
207
blood
196
blood vessel
194
skin of body
168
large intestine
149
liver
143
extraembryonic component
110
stomach
103
eye
88
bone element
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
42
spinal cord
41
esophagus
34
spleen
26
testis
24
lymphoid tissue
23
vein
22
nerve
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
593
AMP
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
552
hg19
123
GRCh38
2
hg18
month_released!
February, 2020
November, 2021
BIOSAMPLE
TYPE
619 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
variant allelic effects
differential activity
Fine-mapped variants
pQTL
caQTL
primary cell
osteoblast
2
2
3
1
5
2
2
fibroblast of lung
6
4
2
4
foreskin fibroblast
6
2
4
1
1
2
fibroblast of dermis
4
4
1
3
fibroblast
1
2
2
6
+ See 40 more…
cell line
K562
7
23
2
7
1
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 38 more…
tissue
adipose tissue
7
8
1
6
2
3
4
1
subcutaneous adipose tissue
2
1
2
4
5
1
1
3
omental fat pad
5
2
2
2
1
1
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 9 more…
in vitro differentiated cells
adipocyte
4
6
1
6
4
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download