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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
20
target gene predictions
18
gene expression
17
chromatin state
16
accessible chromatin
14
histone modifications
7
binding sites
7
eQTL
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
46
September, 2022
26
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
November, 2021
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
86
bed bed3+
18
tsv
15
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
131
Homo sapiens
Biosample type
56
tissue
40
primary cell
28
cell line
7
in vitro differentiated cells
Organ
813
epithelium
640
kidney
448
brain
401
connective tissue
358
musculature of body
302
lung
270
intestine
257
pancreas
vasculature
238
limb
234
heart
218
bodily fluid
213
embryo
207
blood
196
blood vessel
194
skin of body
168
large intestine
149
liver
143
extraembryonic component
110
stomach
103
eye
88
bone element
84
adipose tissue
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
42
spinal cord
41
esophagus
34
spleen
26
testis
24
lymphoid tissue
23
vein
22
nerve
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
131
AMP
Genome assembly (visualization)
108
hg19
40
GRCh38
2
hg18
month_released!
February, 2020
November, 2021
organ_slims!
vasculature
BIOSAMPLE
TYPE
131 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
9
4
2
1
7
1
1
right lobe of liver
2
1
1
1
3
primary cell
hepatocyte
1
2
13
1
7
4
1
2
hepatic stellate cell
1
1
1
1
2
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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