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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
146
accessible chromatin
96
candidate regulatory elements
86
target gene predictions
56
chromatin state
42
gene expression
37
binding sites
29
histone modifications
18
variant allelic effects
17
eQTL
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
144
September, 2022
125
February, 2021
54
November, 2021
29
November, 2022
25
February, 2023
25
June, 2020
19
February, 2024
17
September, 2023
16
May, 2021
14
October, 2022
12
January, 2020
12
May, 2020
11
August, 2021
February, 2020
9
March, 2020
7
August, 2017
7
March, 2023
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
424
bed bed3+
91
bigWig
59
tsv
49
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
551
Homo sapiens
Biosample type
295
primary cell
159
tissue
56
in vitro differentiated cells
40
cell line
1
stem cell
Organ
940
epithelium
643
kidney
449
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
473
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
487
hg19
134
GRCh38
2
hg18
month_released!
February, 2020
BIOSAMPLE
TYPE
551 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
eQTL
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
6
2
pericyte cell
10
1
10
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
+ See 44 more…
tissue
retina
23
6
3
3
1
1
1
adipose tissue
2
7
8
6
3
1
1
4
pigmented layer of retina
20
subcutaneous adipose tissue
2
2
1
4
1
5
1
3
omental fat pad
2
5
2
2
1
1
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
fibroblast
1
1
+ See 9 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
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