Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
176
candidate regulatory elements
131
target gene predictions
96
chromatin state
88
accessible chromatin
48
gene expression
33
differential activity
26
binding sites
15
eQTL
14
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
278
September, 2022
128
February, 2021
47
March, 2023
38
May, 2021
27
November, 2021
26
February, 2024
20
January, 2021
18
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
6
October, 2022
5
January, 2022
4
August, 2017
4
January, 2020
3
April, 2020
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
452
bed bed3+
91
bed bed9
75
tsv
66
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
648
Homo sapiens
Biosample type
293
tissue
192
cell line
160
primary cell
3
in vitro differentiated cells
Organ
940
epithelium
643
kidney
451
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
596
AMP
27
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
556
hg19
148
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
648 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
differential activity
binding sites
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
islet of Langerhans
1
3
6
11
2
13
1
1
2
2
2
body of pancreas
8
5
4
1
1
3
+ See 10 more…
cell line
A549
21
19
18
1
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
2
1
1
2
1
GM12864
2
1
1
1
2
1
GM12865
2
1
1
1
2
1
+ See 24 more…
primary cell
pancreatic ductal cell
3
6
3
3
1
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
fibroblast of lung
6
4
4
2
pancreatic acinar cell
3
6
3
3
1
+ See 18 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download