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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
70
accessible chromatin
59
target gene predictions
51
candidate regulatory elements
48
gene expression
33
differential activity
30
chromatin state
15
eQTL
13
binding sites
13
histone modifications
12
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
83
September, 2022
60
February, 2021
47
March, 2023
35
May, 2021
26
February, 2024
20
January, 2021
18
November, 2021
9
June, 2020
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
3
August, 2017
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
222
bed bed3+
75
tsv
57
bigWig
26
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
353
Homo sapiens
Biosample type
136
primary cell
127
tissue
87
cell line
3
in vitro differentiated cells
Organ
940
epithelium
643
kidney
449
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
313
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
261
hg19
74
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
353 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 14 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
body of pancreas
5
8
1
4
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
prostate gland
1
2
4
2
1
2
2
+ See 8 more…
cell line
EndoC_BH1
8
1
8
3
1
22Rv1
2
4
2
1
1
LNCaP clone FGC
2
3
2
PC-3
1
1
2
1
1
1
RWPE1
1
1
2
1
1
1
+ See 11 more…
in vitro differentiated cells
pancreatic ductal cell
3
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