Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1355
target gene predictions
944
chromatin state
902
accessible chromatin
834
candidate regulatory elements
506
gene expression
168
eQTL
167
differential activity
139
variant allelic effects
137
histone modifications
99
binding sites
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
Date released
840
September, 2022
333
November, 2021
289
June, 2020
223
February, 2024
168
May, 2021
72
May, 2020
66
January, 2020
56
January, 2021
44
March, 2020
44
November, 2022
30
August, 2021
25
February, 2023
19
April, 2020
14
May, 2022
February, 2021
12
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
June, 2021
Available data
2249
bed bed3+
518
bigWig
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
2215
Homo sapiens
Biosample type
856
primary cell
707
tissue
560
cell line
134
in vitro differentiated cells
3
stem cell
Organ
332
epithelium
165
connective tissue
125
kidney
118
brain
107
musculature of body
107
pancreas
96
embryo
94
intestine
93
lung
74
heart
69
bodily fluid
68
eye
67
blood
66
vasculature
63
limb
61
uterus
57
skin of body
54
large intestine
50
blood vessel
45
extraembryonic component
44
liver
38
stomach
28
adrenal gland
26
mammary gland
26
small intestine
23
bone element
21
placenta
20
adipose tissue
20
prostate gland
18
artery
17
lymph node
17
ureter
16
gonad
16
thymus
14
esophagus
14
penis
11
spinal cord
10
pituitary gland
10
spleen
9
ovary
8
lymphoid tissue
8
thyroid gland
7
lymphatic vessel
6
bronchus
6
nerve
6
testis
6
vein
5
bone marrow
5
mouth
4
breast
4
urinary bladder
3
skeleton
3
tongue
2
nose
2
vagina
1
trachea
Project
1851
AMP
333
ENCODE
57
T1D
19
LungMap
Genome assembly (visualization)
2252
hg19
666
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
2260 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
meQTL
primary cell
endothelial cell
7
15
monocyte
2
18
1
fibroblast
4
16
pericyte cell
10
10
CD14-positive monocyte
19
+ See 261 more…
tissue
retina
3
23
heart
20
5
kidney
14
10
stomach
21
3
pigmented layer of retina
20
+ See 131 more…
cell line
HeLa-S3
55
H1-hESC
39
1
K562
23
1
A549
19
1
HFFc6
19
+ See 242 more…
in vitro differentiated cells
neural progenitor cell
5
10
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
4
embryonic stem cell
1
6
dendritic cell
6
+ See 52 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
Download