Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
483
accessible chromatin
370
target gene predictions
356
gene expression
chromatin state
161
candidate regulatory elements
152
differential activity
118
histone modifications
80
variant allelic effects
44
eQTL
29
binding sites
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
February, 2021
333
November, 2021
327
September, 2022
281
September, 2023
256
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
55
March, 2023
53
June, 2020
42
August, 2021
37
January, 2022
31
October, 2022
21
January, 2020
19
April, 2020
16
February, 2020
13
May, 2022
9
August, 2018
9
November, 2022
5
March, 2020
5
October, 2019
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1255
bed bed3+
467
tsv
406
bigWig
25
txt
13
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1771
Homo sapiens
Biosample type
1816
primary cell
1500
tissue
857
cell line
237
in vitro differentiated cells
3
stem cell
Organ
608
epithelium
207
kidney
198
connective tissue
124
vasculature
119
pancreas
82
blood vessel
54
liver
54
skin of body
38
musculature of body
26
brain
26
mammary gland
24
extraembryonic component
24
lung
22
heart
22
intestine
19
artery
16
penis
15
eye
13
embryo
13
lymphatic vessel
11
adrenal gland
11
stomach
10
vein
9
bronchus
8
esophagus
6
bone element
6
bone marrow
6
large intestine
6
placenta
6
prostate gland
4
gonad
4
small intestine
3
thyroid gland
3
uterus
2
mouth
2
ovary
2
spinal cord
1
adipose tissue
1
blood
1
bodily fluid
1
limb
1
pericardium
1
testis
1
thymus
1
trachea
Project
1124
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1272
hg19
542
GRCh38
month_released!
February, 2021
annotation_type!
chromatin state
BIOSAMPLE
TYPE
1816 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
histone modifications
variant allelic effects
eQTL
binding sites
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
84
4
2
1
1
CD8-positive, alpha-beta T cell
4
5
3
30
endothelial cell
15
7
5
2
1
2
fibroblast
16
4
6
2
1
macrophage
12
3
2
3
7
1
+ See 374 more…
See all biosamples
Download