Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
accessible chromatin
112
eQTL
82
gene expression
74
Fine-mapped variants
59
target gene predictions
52
chromatin state
48
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
binding sites
1
candidate regulatory elements
1
other
Date released
September, 2022
February, 2021
104
March, 2020
63
June, 2020
62
January, 2020
60
May, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
28
March, 2024
26
February, 2023
26
February, 2024
19
August, 2017
17
November, 2022
10
November, 2019
9
May, 2019
8
April, 2019
6
March, 2023
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
322
bed bed3+
184
tsv
111
bigWig
31
bigBed bed9
27
bed bed9
1
bam
Organism
632
Homo sapiens
Biosample type
1526
primary cell
634
tissue
506
cell line
176
in vitro differentiated cells
4
stem cell
Organ
129
brain
80
heart
62
pancreas
47
eye
46
limb
45
connective tissue
44
blood vessel
44
vasculature
40
musculature of body
39
adipose tissue
39
kidney
37
epithelium
27
artery
24
liver
23
intestine
15
large intestine
13
nerve
10
stomach
8
esophagus
8
gonad
8
spinal cord
7
ureter
6
adrenal gland
6
spleen
5
extraembryonic component
5
lung
5
ovary
5
skin of body
5
small intestine
5
uterus
4
bodily fluid
4
breast
4
thymus
4
thyroid gland
3
blood
3
embryo
3
mouth
3
placenta
3
prostate gland
3
testis
3
urinary bladder
2
lymphoid tissue
2
pituitary gland
2
tongue
2
vagina
1
vein
Project
629
AMP
5
ITG
Genome assembly (visualization)
468
hg19
266
GRCh38
3
hg18
month_released!
February, 2021
September, 2022
BIOSAMPLE
TYPE
634 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
eQTL
gene expression
Fine-mapped variants
target gene predictions
chromatin state
variant allelic effects
differential activity
variant to gene
pQTL
caQTL
sQTL
binding sites
candidate regulatory elements
other
tissue
islet of Langerhans
5
12
5
2
1
3
1
2
2
1
retina
23
1
1
1
pigmented layer of retina
20
liver
4
7
1
3
2
1
1
subcutaneous adipose tissue
2
5
2
3
1
1
1
+ See 173 more…
See all biosamples
Download