Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
94
accessible chromatin
62
chromatin state
54
candidate regulatory elements
28
gene expression
21
eQTL
17
variant allelic effects
14
differential activity
11
binding sites
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
162
September, 2022
February, 2021
60
November, 2021
21
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
287
bed bed3+
60
bigWig
55
bed bed9
44
tsv
2
bigBed bed9
1
bigBed narrowPeak
1
txt
Organism
410
Homo sapiens
Biosample type
238
primary cell
117
tissue
39
in vitro differentiated cells
15
cell line
1
stem cell
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
324
AMP
60
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
357
hg19
146
GRCh38
2
hg18
month_released!
February, 2021
BIOSAMPLE
TYPE
410 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
eQTL
variant allelic effects
differential activity
binding sites
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
2
6
1
pericyte cell
10
10
1
1
fibroblast of lung
4
4
3
2
fibroblast of cardiac tissue
4
2
3
3
fibroblast of dermis
4
3
3
1
+ See 46 more…
tissue
adrenal gland
17
1
14
14
1
1
adipose tissue
8
2
6
6
4
1
omental fat pad
2
2
2
2
2
2
3
subcutaneous adipose tissue
2
1
2
5
1
1
3
cartilage tissue
2
2
+ See 6 more…
in vitro differentiated cells
adipocyte
6
4
6
2
mesenchymal stem cell
3
1
2
2
chondrocyte
5
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
+ See 6 more…
cell line
GM23248
1
1
1
1
HT1080
1
1
1
foreskin fibroblast
1
1
1
fibroblast of cardiac tissue
2
adipose-derived mesenchymal stem cell
1
+ See 2 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download