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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
target gene predictions
17
accessible chromatin
17
chromatin state
15
gene expression
14
candidate regulatory elements
8
eQTL
7
histone modifications
4
variant allelic effects
3
Fine-mapped variants
2
binding sites
1
caQTL
1
differential activity
Date released
46
September, 2022
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
67
bed bed3+
16
bigWig
16
tsv
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
110
Homo sapiens
Biosample type
48
tissue
36
primary cell
20
cell line
6
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
351
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
107
AMP
3
ENCODE
Genome assembly (visualization)
90
hg19
43
GRCh38
2
hg18
month_released!
February, 2021
organ_slims!
vasculature
BIOSAMPLE
TYPE
110 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
gene expression
candidate regulatory elements
eQTL
histone modifications
variant allelic effects
Fine-mapped variants
binding sites
caQTL
differential activity
tissue
liver
10
4
9
1
7
7
1
1
right lobe of liver
1
1
1
1
1
3
primary cell
hepatocyte
3
8
1
10
1
3
2
hepatic stellate cell
1
3
1
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
3
1
2
1
4
2
HuH-7
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
1
1
1
hepatocyte(AFP)
3
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