Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
target gene predictions
92
accessible chromatin
91
chromatin state
81
candidate regulatory elements
53
gene expression
34
differential activity
20
eQTL
17
variant allelic effects
11
Fine-mapped variants
2
binding sites
2
caQTL
2
sQTL
2
variant to gene
Date released
248
September, 2022
February, 2021
47
March, 2023
40
February, 2024
39
May, 2021
29
November, 2021
20
January, 2021
18
March, 2020
11
May, 2020
10
June, 2020
9
August, 2021
9
January, 2020
8
February, 2020
7
August, 2018
7
October, 2019
6
August, 2017
5
January, 2022
3
May, 2022
3
October, 2022
2
March, 2024
2
May, 2019
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
325
bed bed3+
84
bed bed9
84
tsv
70
bigWig
11
bigBed narrowPeak
5
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
529
Homo sapiens
Biosample type
322
tissue
160
primary cell
43
cell line
4
in vitro differentiated cells
Organ
753
epithelium
464
kidney
356
brain
349
connective tissue
283
musculature of body
246
pancreas
241
lung
218
intestine
217
vasculature
207
heart
186
limb
168
blood vessel
162
embryo
144
bodily fluid
137
blood
136
skin of body
130
liver
128
large intestine
113
extraembryonic component
92
eye
90
stomach
73
uterus
66
adipose tissue
66
small intestine
60
artery
59
adrenal gland
59
mammary gland
55
placenta
53
bone element
49
prostate gland
46
ureter
38
gonad
38
thymus
36
penis
35
esophagus
35
lymph node
34
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
18
testis
16
lymphatic vessel
16
vein
15
mouth
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
478
AMP
29
ENCODE
20
T1D
2
community
Genome assembly (visualization)
436
hg19
157
GRCh38
month_released!
February, 2021
BIOSAMPLE
TYPE
529 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
binding sites
caQTL
sQTL
variant to gene
tissue
muscle of arm
16
1
16
16
1
muscle of leg
14
2
15
13
muscle of back
13
13
13
islet of Langerhans
1
6
3
5
12
1
2
1
2
2
body of pancreas
5
4
4
2
1
1
3
+ See 25 more…
primary cell
pancreatic beta cell
2
8
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
pancreatic ductal cell
3
6
3
3
1
pancreatic alpha cell
2
7
3
3
+ See 18 more…
cell line
EndoC_BH1
1
8
8
3
1
A673
2
1
1
LHCN-M2
1
1
1
1
Panc1
2
1
1
SJCRH30
1
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
myotube
1
See all biosamples
Download