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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
870
accessible chromatin
839
candidate regulatory elements
817
binding sites
645
gene expression
523
target gene predictions
166
differential activity
145
eQTL
139
variant allelic effects
110
chromatin state
74
Fine-mapped variants
8
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
pQTL
2
other
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
February, 2023
30
March, 2024
19
April, 2020
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4201
bed bed3+
852
tsv
511
bigWig
108
txt
39
bigBed bed9
35
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
5284
Homo sapiens
Biosample type
1964
primary cell
1808
cell line
1191
tissue
363
in vitro differentiated cells
4
stem cell
Organ
776
epithelium
418
kidney
330
connective tissue
267
brain
228
pancreas
179
vasculature
165
musculature of body
143
bodily fluid
138
blood
134
embryo
132
blood vessel
130
heart
125
intestine
107
liver
102
skin of body
101
lung
98
limb
76
large intestine
71
uterus
60
adipose tissue
56
eye
50
stomach
47
bone element
47
extraembryonic component
45
artery
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
18
spinal cord
17
vein
16
thymus
15
lymphatic vessel
15
spleen
14
testis
13
pituitary gland
12
nerve
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
Project
4622
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4388
hg19
988
GRCh38
4
hg18
month_released!
February, 2023
September, 2022
November, 2019
February, 2020
BIOSAMPLE
TYPE
5330 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
pQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
1
hepatocyte
4
8
1
13
2
2
fibroblast
16
1
4
2
6
+ See 437 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
EndoC_BH1
1
7
1
8
1
2
1
breast cancer cell
11
9
+ See 746 more…
tissue
islet of Langerhans
1
4
2
11
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
4
18
1
2
1
2
2
stomach
1
3
21
1
2
1
liver
2
3
6
1
3
1
7
2
1
+ See 253 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
1
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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