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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1647
candidate regulatory elements
1335
target gene predictions
963
histone modifications
926
chromatin state
863
accessible chromatin
804
binding sites
659
gene expression
163
eQTL
162
differential activity
135
variant allelic effects
71
Fine-mapped variants
7
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
283
June, 2020
218
November, 2021
63
January, 2020
54
May, 2020
44
November, 2022
40
February, 2024
30
August, 2021
28
January, 2021
26
May, 2021
February, 2023
19
April, 2020
13
May, 2022
11
November, 2019
10
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
2
November, 2020
2
September, 2018
1
June, 2021
Available data
853
bed bed3+
495
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
818
Homo sapiens
Biosample type
467
primary cell
168
tissue
160
cell line
68
in vitro differentiated cells
Organ
202
epithelium
88
connective tissue
65
pancreas
50
kidney
42
brain
35
eye
35
vasculature
27
musculature of body
25
blood vessel
25
heart
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
nose
1
tongue
1
trachea
1
urinary bladder
Project
597
AMP
218
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
855
hg19
373
GRCh38
month_released!
February, 2023
organ_slims!
liver
nose
BIOSAMPLE
TYPE
863 results
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Clear Filters
accessible chromatin
primary cell
monocyte
18
fibroblast
16
endothelial cell
15
excitatory neuron
12
macrophage
12
+ See 214 more…
tissue
kidney
10
pigmented layer of retina
10
retina
9
islet of Langerhans
6
heart
5
+ See 94 more…
cell line
EndoC_BH1
8
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 146 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 29 more…
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