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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
162
candidate regulatory elements
133
target gene predictions
101
accessible chromatin
91
chromatin state
55
gene expression
32
differential activity
20
histone modifications
19
binding sites
18
eQTL
14
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
250
September, 2022
138
February, 2021
47
March, 2023
39
May, 2021
38
November, 2021
31
February, 2024
22
January, 2021
19
June, 2020
11
March, 2020
8
August, 2021
7
August, 2017
7
August, 2018
7
January, 2022
7
May, 2020
6
October, 2019
4
January, 2020
3
March, 2024
2
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
February, 2023
1
January, 2018
1
June, 2021
1
May, 2022
Available data
457
bed bed3+
82
bed bed9
82
tsv
78
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
1
bed bed9+
Organism
654
Homo sapiens
Biosample type
368
tissue
163
primary cell
120
cell line
3
in vitro differentiated cells
Organ
937
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
592
AMP
38
ENCODE
22
T1D
2
community
Genome assembly (visualization)
554
hg19
163
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
654 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
differential activity
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
tissue
small intestine
29
17
1
15
1
large intestine
27
14
1
13
1
islet of Langerhans
1
6
3
11
1
2
13
1
2
2
2
body of pancreas
8
5
4
2
1
1
3
sigmoid colon
10
7
1
5
+ See 38 more…
primary cell
pancreatic ductal cell
3
6
3
3
2
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 25 more…
cell line
EndoC_BH1
1
8
8
2
1
HT-29
2
2
1
1
1
1
MG63
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
+ See 20 more…
in vitro differentiated cells
pancreatic ductal cell
3
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