Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
candidate regulatory elements
120
target gene predictions
107
chromatin state
71
accessible chromatin
43
gene expression
35
binding sites
22
histone modifications
18
differential activity
18
variant allelic effects
9
Fine-mapped variants
9
eQTL
Date released
281
September, 2022
156
February, 2021
35
September, 2023
26
November, 2021
23
February, 2024
21
June, 2020
16
January, 2020
16
May, 2020
14
March, 2020
9
May, 2021
6
January, 2022
6
October, 2022
5
August, 2017
5
February, 2020
February, 2023
4
March, 2023
4
March, 2024
3
April, 2020
3
November, 2019
2
January, 2021
2
October, 2019
1
August, 2021
1
May, 2019
1
May, 2022
Available data
457
bed bed3+
101
bed bed9
71
tsv
51
bigWig
8
bigBed bed9
2
txt
1
bed bed9+
Organism
640
Homo sapiens
Biosample type
336
tissue
204
primary cell
98
cell line
2
in vitro differentiated cells
Organ
937
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
574
AMP
35
KPMP
26
ENCODE
3
LungMap
2
T1D
Genome assembly (visualization)
571
hg19
185
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
640 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
differential activity
variant allelic effects
Fine-mapped variants
eQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
coronary artery
3
3
3
2
1
2
3
2
tibial artery
3
2
3
3
1
2
3
2
+ See 36 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
1
2
1
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 40 more…
cell line
HT-29
2
2
1
1
1
1
MG63
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
OCI-LY1
2
1
1
1
1
+ See 18 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download