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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
135
candidate regulatory elements
120
target gene predictions
107
accessible chromatin
89
chromatin state
67
gene expression
54
histone modifications
44
eQTL
41
Fine-mapped variants
32
differential activity
28
variant allelic effects
21
binding sites
2
sQTL
2
variant to gene
Date released
224
September, 2022
141
February, 2021
47
March, 2020
47
March, 2023
44
May, 2021
33
January, 2020
26
February, 2024
25
June, 2020
25
May, 2020
22
January, 2022
20
February, 2020
20
January, 2021
18
November, 2021
9
August, 2017
8
August, 2021
7
August, 2018
6
October, 2019
6
October, 2022
4
May, 2019
3
November, 2019
3
September, 2023
1
April, 2019
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
468
bed bed3+
142
tsv
79
bed bed9
78
bigWig
14
bigBed narrowPeak
8
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
741
Homo sapiens
Biosample type
463
tissue
161
primary cell
110
cell line
7
in vitro differentiated cells
1
stem cell
Organ
937
epithelium
652
kidney
466
brain
457
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
702
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
609
hg19
213
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
742 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
Fine-mapped variants
differential activity
variant allelic effects
binding sites
sQTL
variant to gene
tissue
brain
29
16
2
18
1
3
2
1
1
islet of Langerhans
1
6
3
11
1
13
2
1
2
2
2
body of pancreas
8
5
4
2
1
3
1
caudate nucleus
5
3
2
4
1
1
2
3
1
pancreas
5
5
5
3
1
1
1
1
+ See 67 more…
primary cell
pancreatic ductal cell
3
6
3
2
3
1
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 21 more…
cell line
EndoC_BH1
1
8
8
2
1
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 15 more…
in vitro differentiated cells
pancreatic ductal cell
3
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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