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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
accessible chromatin
53
target gene predictions
49
gene expression
42
candidate regulatory elements
32
differential activity
26
chromatin state
16
eQTL
13
variant allelic effects
11
binding sites
10
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
71
September, 2022
48
February, 2021
47
March, 2023
33
May, 2021
26
February, 2024
February, 2023
22
November, 2021
22
November, 2022
20
January, 2021
10
June, 2020
9
March, 2020
8
August, 2021
8
May, 2020
7
August, 2018
6
January, 2020
6
October, 2019
4
February, 2020
4
January, 2022
3
August, 2017
2
November, 2019
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
Available data
233
bed bed3+
77
tsv
75
bigWig
22
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
361
Homo sapiens
Biosample type
160
tissue
149
primary cell
43
cell line
9
in vitro differentiated cells
Organ
937
epithelium
652
kidney
466
brain
457
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
262
vasculature
252
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
89
adipose tissue
89
bone element
87
mammary gland
85
eye
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
72
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
317
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
269
hg19
77
GRCh38
month_released!
February, 2023
BIOSAMPLE
TYPE
361 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
retina
9
3
1
6
3
1
1
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 10 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 18 more…
cell line
EndoC_BH1
8
1
8
2
1
WERI-Rb-1
1
1
2
1
2
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 4 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
pancreatic ductal cell
3
See all biosamples
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