Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
85
candidate regulatory elements
53
target gene predictions
44
chromatin state
12
accessible chromatin
8
binding sites
5
histone modifications
4
eQTL
3
Fine-mapped variants
3
gene expression
Date released
122
September, 2022
55
February, 2021
9
June, 2020
6
May, 2021
6
November, 2021
4
March, 2020
3
August, 2017
3
February, 2024
3
January, 2022
2
March, 2024
2
October, 2022
1
February, 2020
1
January, 2020
Available data
166
bed bed3+
41
bed bed9
7
tsv
3
bigWig
Organism
217
Homo sapiens
Biosample type
170
tissue
37
cell line
10
primary cell
Organ
949
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
lung
289
intestine
276
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
211
AMP
6
ENCODE
Genome assembly (visualization)
211
hg19
56
GRCh38
month_released!
January, 2018
organ_slims!
lung
BIOSAMPLE
TYPE
217 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
Fine-mapped variants
gene expression
tissue
large intestine
27
14
13
1
1
spinal cord
14
8
7
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 4 more…
primary cell
colon epithelial cell
3
3
astrocyte of the spinal cord
2
1
1
See all biosamples
Download